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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917820.1_cds_XP_016467370.1_60120
CDS Infomation

[gene=LOC107789997] [db_xref=GeneID:107789997] [protein=zinc finger CCCH domain-containing protein 18-like isoform X4] [protein_id=XP_016467370.1] [location=complement(join(3653..3725,4140..4266,4374..4544,4625..4701,5376..5555,5643..5810,5896..6836))] [gbkey=CDS]
Sequence

ATGAACATGGACTTTTCCGAGTCTACAAAAGTTGTATATAATCGAATTCAGAAACTAGAG
CCAGAAAATGTGTCTAAGATAATTGGTTATCTCCTTTTACAAGATCATGGTGAACAGGAT
ATGATTAGATTAGCGTTTAGTCCCGACAATTTGATCCATTCCTTGATTAATAAAGCTAAG
AAAGATCTTGGATTATCATCCAAACCAGCCATTTCTGGTCCTCTTTCACCCCCCTTAGTC
AATCGAGCATTATCTTCAGACATTCCCTTGAACTTTGTTCCATTCTCATCAGCTTCACCT
CGTCCCTTTTCGACTCTTCAAGTTGGAAATCCATACTGGGAGCCTCAAGGTCATGCCGAA
AATCATCCAATTCATACCTTGGATTTTCTACCTGTTGGTTGCTCGGATACTATGACCGAT
GAACGCCAACTCCCAAACCAACTTCAGTTCTTATCTTTAGATGATCAGTCAGACCATGTT
AATTCAGAATTCTCCGGCGACCACTATTTCTCTGTATCTGCATTAGGCCCAAGATCGAGT
CGAAGGTCTCCAAGCTTGCCCGAGTTTCCTGTTAAGGTCTGCCATTATTTTAACAAAGGC
TTTTGTAAGCATGGAACCAACTGTCGGTACTTTCACGGCCATCCAAATCCGGAAAGCTTC
TCCCAAGTCTTCAACTCAAACTTAAATGAAATGGGAAGTGATGAACATATCTTCAAGCCT
GGATCTCTAGAGAAAATAGAGATGGAACTTACCGAGCTTCTCAAATCTAGACGGGGTCTT
CCTGTTTCAATTGCTTCGTTGCCTATGTTGTACTATGAGAAGTATGGGAGGACACTTCAG
GCTGAGGGTTATTTGACCGAAAGTCAAAGACATGGGAAAGCTGGATATAGCCTGACTAAG
CTCCTCGCTCGATTAAGAAATAGCATTCGTGTCATCGACAGGCCCCATGGACAGCATGCC
GTTATTTTAGCTGAGGATGTTCCAAAATATATGGAGTACAGTGGCGAAAGAAATGAACAC
GGAGCAATTGTAGCCGGTTCTCGCCAGATTTATCTGACCTTTCCGGCTGAGAGTACCTTC
AGCGAGCAAGATGTTTCCAACTATTTCAATCAATTTGGACCAGTACAAGATGTTAGGATT
CCTTGTCAGCAGAAGAGAATGTTTGGGTTTGTAACTTTTGTTTTCCCAGAGACAGTTAAG
CAGATCCTGGCAAAGGGGAATCCTCATTTAGTTTGTGGTGCACGTGTTTTGGTGAAACCT
TACAGGGAAAAGTCCAAGCTTGTAGATAGAAAATGCCTCGAGAAAGCTTATCAAGCTTCC
TACTATAATTCCTCGTTCATTGACGCAGAATCCGAACTCCAATCTTCACCTAGAGTCTGT
GAAAATTCAAGACTAATGAAAAAACAACTCATGGAGGAACAAGAGCGTGCAATTGAGTTT
GAGAGGCAGCATTTTCCAGAGTTGCAATTAGCTGCAAAAACTTTGCATCATCAAATGCGC
CTTGGTTACTCAGTAGAGGATTTGAAGCTTAGAGAAGGCCGTAGCGAAAAACTGGAGTTC
CCATCAGCCGAGAGTTTTAATTACCTGCTAGATGTATATAACAATGGTTCCACCAGCGAG
GACAAAGCTAGGCACGTTAAAATGAGTCACTGTGACCAAGAAGGTGGTCAAGGATTGAAT
CTTCCAGATAGCCCGTTTGCATCTCCAATAAGGAATGGCATTTCAACTGTCATTTAG

Peptide Sequence

PEP ID

XP_016467370.1
PEP Infomation

PREDICTED: zinc finger CCCH domain-containing protein 18-like isoform X4 [Nicotiana tabacum]
Sequence

MNMDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGEQDMIRLAFSPDNLIHSLINKAK
KDLGLSSKPAISGPLSPPLVNRALSSDIPLNFVPFSSASPRPFSTLQVGNPYWEPQGHAE
NHPIHTLDFLPVGCSDTMTDERQLPNQLQFLSLDDQSDHVNSEFSGDHYFSVSALGPRSS
RRSPSLPEFPVKVCHYFNKGFCKHGTNCRYFHGHPNPESFSQVFNSNLNEMGSDEHIFKP
GSLEKIEMELTELLKSRRGLPVSIASLPMLYYEKYGRTLQAEGYLTESQRHGKAGYSLTK
LLARLRNSIRVIDRPHGQHAVILAEDVPKYMEYSGERNEHGAIVAGSRQIYLTFPAESTF
SEQDVSNYFNQFGPVQDVRIPCQQKRMFGFVTFVFPETVKQILAKGNPHLVCGARVLVKP
YREKSKLVDRKCLEKAYQASYYNSSFIDAESELQSSPRVCENSRLMKKQLMEEQERAIEF
ERQHFPELQLAAKTLHHQMRLGYSVEDLKLREGRSEKLEFPSAESFNYLLDVYNNGSTSE
DKARHVKMSHCDQEGGQGLNLPDSPFASPIRNGISTVI

Transcript Sequence

Gene sequence data has not been registered.